PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.6G238800.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 287aa    MW: 31621.3 Da    PI: 8.6591
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.6G238800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.97.8e-121644533
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                        k  rr+++NReAAr+sR+RKka+i++Le 
  Sevir.6G238800.2.p 16 KTVRRLAQNREAARKSRLRKKAYIQQLES 44
                        5679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-51287IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8641458IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-81456No hitNo description
SuperFamilySSF579591.48E-71649No hitNo description
PfamPF001701.5E-81645IPR004827Basic-leucine zipper domain
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
PfamPF141443.5E-2896169IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MATGSTPKTG KALDPKTVRR LAQNREAARK SRLRKKAYIQ QLESSKLKLA QMEQDVQRAR  60
SQGLFLGGGP GANTSSGAAM FDVGYARWLD DHGRRMAELQ GALHSHLPDG DLRAIVDDTL  120
THHDELFQLK VVAAKSDVSH LINGAWTTPA ERCFLWMGGF RPSDLLKTLL PQLDPLTEQQ  180
VVGICNLQRS SQEAEEALSQ GLEQLHQSLA DTMAGGSLID DINMSFMGQM ALALGKLANL  240
EGFVIQADNL RQQALHQMHR ILTVRQAARC FLAIGCWWQM KAIVER*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1113210.0KF111321.1 Zea mays cultivar B73 basic leucine zipper transcription factor mRNA, complete cds, alternatively spliced.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978700.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241601e-112TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotP239231e-112HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLK3YKU20.0K3YKU2_SETIT; Uncharacterized protein
STRINGSi014861m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-123bZIP family protein